STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ17303.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (460 aa)    
Predicted Functional Partners:
SIR04496.1
Dienelactone hydrolase.
  
     0.588
SIS23952.1
Dienelactone hydrolase.
  
     0.565
SIR93618.1
Calcineurin-like phosphoesterase.
  
     0.564
SIS10945.1
Histidine kinase-like ATPase domain-containing protein.
  
     0.517
SIQ17706.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.506
SIR61239.1
Hypothetical protein.
  
     0.481
SIQ19364.1
Helix-turn-helix.
  
     0.475
SIQ24200.1
Hypothetical protein.
  
     0.456
SIR22441.1
Hypothetical protein.
  
     0.455
SIQ51607.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.