STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ53834.1ABC-2 type transport system ATP-binding protein. (340 aa)    
Predicted Functional Partners:
SIQ53800.1
ABC-2 type transport system permease protein.
  
  0.956
SIR24251.1
ABC-2 type transport system permease protein/oleandomycin transport system permease protein.
 
 
  0.882
SIS22152.1
Oleandomycin transport system permease protein.
 
 
  0.872
SIR90266.1
ABC-2 type transport system permease protein.
 
  
  0.816
SIR93580.1
ABC transporter efflux protein, DrrB family.
 
 
  0.815
SIQ24677.1
ABC-type multidrug transport system, permease component.
 
 
  0.812
SIR47538.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
  0.792
SIS20773.1
ABC-2 type transport system permease protein.
 
 
  0.789
SIR73384.1
ABC-2 type transport system permease protein.
 
  
 0.786
SIR37905.1
ABC-2 type transport system permease protein.
  
    0.779
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.