STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ68188.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (415 aa)    
Predicted Functional Partners:
SIQ98919.1
Glucokinase/fructokinase.
 
  
  0.867
SIR59558.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.774
SIQ47150.1
MarR family protein.
  
     0.729
SIR52319.1
Fructokinase.
  
     0.710
SIQ23868.1
Glucokinase.
 
  
 
0.585
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.570
SIQ68218.1
Hypothetical protein.
       0.500
SIQ52655.1
PTS system, N-acetylglucosamine-specific IIC component.
   
 0.489
SIQ52764.1
PTS system N-acetylglucosamine-specific IIB component, Glc family.
   
 0.489
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.461
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.