STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ73873.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SIQ73901.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
       0.664
SIQ73937.1
Transcriptional regulator, contains XRE-family HTH domain.
       0.660
SIQ30621.1
Protein of unknown function DUF43.
  
     0.598
SIS21898.1
Hypothetical protein.
  
     0.576
SIS11999.1
Hypothetical protein.
  
     0.566
SIQ73841.1
GNAT acetyltransferase.
       0.556
SIS20161.1
Helix-turn-helix domain-containing protein.
  
     0.541
SIR81522.1
Predicted transcriptional regulator, ArsR family.
  
     0.492
SIS11945.1
TadE-like protein.
  
     0.492
SIQ49313.1
Enoyl reductase.
  
     0.490
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.