STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ76315.1Conserved hypothetical protein. (131 aa)    
Predicted Functional Partners:
SIQ76283.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.845
SIS23588.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.543
SIQ71883.1
Hypothetical protein.
  
     0.511
SIQ20520.1
ABC-2 type transport system permease protein.
  
     0.473
SIR91943.1
Transcriptional regulator, TetR family.
  
     0.464
SIQ72764.1
Protein of unknown function.
  
     0.446
SIR55427.1
Transcriptional regulatory protein, C terminal.
  
     0.444
SIQ76250.1
N-acetylglutamate synthase, GNAT family.
       0.437
SIR04496.1
Dienelactone hydrolase.
  
     0.437
SIS23952.1
Dienelactone hydrolase.
  
     0.435
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.