STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ66261.1Dolichol-phosphate mannosyltransferase. (493 aa)    
Predicted Functional Partners:
SIQ66325.1
Putative membrane protein.
 
   
 0.964
SIQ66295.1
Phytoene desaturase.
 
  
 0.936
SIR74340.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.724
SIQ66203.1
Spheroidene monooxygenase.
 
   
 0.664
SIQ66143.1
Phytoene synthase.
 
  
 0.622
SIS05965.1
Tetratricopeptide repeat-containing protein.
  
   0.581
SIQ66362.1
Predicted oxidoreductase.
       0.578
SIR79489.1
Polysaccharide deacetylase.
 
 
  0.562
SIR54740.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
 
 0.541
SIQ66396.1
Dienelactone hydrolase family protein.
       0.528
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.