STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ86621.1Putative spermidine/putrescine transport system substrate-binding protein. (384 aa)    
Predicted Functional Partners:
SIR45354.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.937
SIR45377.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.936
SIR45405.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.903
SIS16523.1
Putative spermidine/putrescine transport system substrate-binding protein.
  
  
  0.735
SIR45318.1
Putative spermidine/putrescine transport system substrate-binding protein.
  
  
 
0.734
SIQ86584.1
Hypothetical protein.
       0.664
SIR63871.1
Molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.659
SIQ29940.1
Putative spermidine/putrescine transport system permease protein.
    
  0.629
SIR39567.1
Spermidine/putrescine transport system permease protein.
    
  0.629
SIQ29890.1
Putative spermidine/putrescine transport system permease protein.
  
 
  0.628
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.