STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ89259.1Lysophospholipase, alpha-beta hydrolase superfamily. (444 aa)    
Predicted Functional Partners:
SIQ89230.1
Metabolite-proton symporter.
 
     0.809
SIQ89288.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.773
SIQ89200.1
Transcriptional regulator, CdaR family.
 
     0.693
SIS13719.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.624
SIQ89157.1
3-hydroxybutyrate dehydrogenase.
       0.558
SIQ53273.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.489
SIR17276.1
Transcriptional regulator, ArsR family.
  
     0.479
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.460
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.427
SIS20232.1
Tn3 transposase DDE domain-containing protein.
  
     0.426
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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