STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ98112.1Aminopeptidase Y. (511 aa)    
Predicted Functional Partners:
SIS11144.1
Zn-dependent metalloprotease.
 
  
 0.926
SIR55218.1
Hypothetical protein.
    
  0.771
SIR90475.1
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
  
 0.763
SIS24510.1
Para-nitrobenzyl esterase.
  
 0.763
SIS25457.1
PLD-like domain-containing protein.
    
  0.501
SIS25461.1
Protein of unknown function.
    
  0.501
SIS24423.1
Hypothetical protein.
    
  0.499
SIR98340.1
Immune inhibitor A peptidase M6.
  
     0.496
SIR81940.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.495
SIQ98142.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
       0.480
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.