STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ99170.1Acetyl-CoA acetyltransferase. (391 aa)    
Predicted Functional Partners:
SIQ99109.1
Uncharacterized OB-fold protein, contains Zn-ribbon domain.
 
  0.999
SIR26231.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.998
SIR46802.1
Hypothetical protein.
  0.976
SIQ99137.1
MaoC like domain-containing protein.
 
  0.962
SIQ57011.1
Hypothetical protein.
 
 0.936
SIS23836.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 0.866
SIR73260.1
Hypothetical protein.
 
  0.851
SIQ98712.1
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase.
 
  0.842
SIR73245.1
Hypothetical protein.
 
  0.823
SIQ56696.1
Acyl-CoA dehydrogenase.
 
  0.792
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.