STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR14355.1Exo-1,4-beta-glucosidase. (937 aa)    
Predicted Functional Partners:
SIR14424.1
Broad-specificity cellobiase.
    
  0.865
SIR14394.1
Transcriptional regulator, LacI family.
 
  
  0.828
SIR13987.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.822
SIS20977.1
Endoglucanase.
  
  
  0.712
SIR74179.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
     
 0.663
SIR60065.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.579
SIS16829.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.571
SIR40185.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 
  0.563
SIS18668.1
Endoglucanase.
  
  
  0.557
SIS18661.1
Cellulose binding domain-containing protein.
  
  
  0.546
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.