STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR17033.1Signal transduction histidine kinase. (407 aa)    
Predicted Functional Partners:
SIR17004.1
Two component transcriptional regulator, LuxR family.
  0.912
SIR37156.1
Two component transcriptional regulator, LuxR family.
 
  0.730
SIR48195.1
Signal transduction histidine kinase.
  
  0.706
SIR65464.1
GAF sensor hybrid histidine kinase.
  
  0.706
SIR81838.1
Two component transcriptional regulator, LuxR family.
  0.667
SIS23575.1
Two component transcriptional regulator, LuxR family.
 
  0.655
SIS21483.1
Two component transcriptional regulator, LuxR family.
  
  0.632
SIQ23063.1
Two component transcriptional regulator, LuxR family.
 
  0.625
SIQ18549.1
Two component transcriptional regulator, LuxR family.
 
  0.614
SIS23166.1
Two component transcriptional regulator, LuxR family.
  
  0.607
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.