STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR25406.1Mannose-6-phosphate isomerase, cupin superfamily. (168 aa)    
Predicted Functional Partners:
SIR25376.1
Protein of unknown function.
 
     0.780
SIR25437.1
G/U mismatch-specific uracil-DNA glycosylase.
       0.678
SIR25524.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
       0.678
SIQ21101.1
Ketosteroid isomerase homolog.
  
     0.580
SIR25347.1
Transcriptional regulator, TetR family.
 
     0.545
SIR88732.1
Cupin domain protein.
 
  0.504
SIS20063.1
Hypothetical protein.
  
     0.458
SIS21533.1
Hypothetical protein.
  
     0.450
SIS15974.1
Platelet-activating factor acetylhydrolase, isoform II.
  
     0.445
SIS21924.1
DNA-binding transcriptional activator of the SARP family.
  
    0.403
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.