STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR28346.1Carbon-monoxide dehydrogenase medium subunit. (291 aa)    
Predicted Functional Partners:
SIR28374.1
Carbon-monoxide dehydrogenase small subunit.
 0.999
SIR28404.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
 0.999
SIQ19236.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.998
SIQ24893.1
Carbon-monoxide dehydrogenase small subunit.
 0.991
SIQ27056.1
Xanthine dehydrogenase accessory factor.
 
 
 0.959
SIQ27080.1
Nicotine blue oxidoreductase.
 
 
 0.920
SIR28569.1
Hypothetical protein.
 
 
 0.890
SIR28320.1
Uracil-xanthine permease.
 
   
 0.827
SIQ27029.1
Hypothetical protein.
 
     0.725
SIQ30661.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.703
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.