STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR23415.1Hypothetical protein. (246 aa)    
Predicted Functional Partners:
SIR23438.1
Probable phosphoglycerate mutase.
 
  
 0.973
SIR23385.1
Dinuclear metal center protein, YbgI/SA1388 family.
  
  
 0.874
SIR48195.1
Signal transduction histidine kinase.
    
  0.854
SIR65464.1
GAF sensor hybrid histidine kinase.
    
  0.854
SIQ23243.1
Hypothetical protein.
  
     0.706
SIS02870.1
Protein of unknown function.
  
     0.630
rbpA-2
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.613
SIR23354.1
Dipeptidase. Metallo peptidase. MEROPS family M19.
       0.540
SIR26435.1
Protein of unknown function.
  
     0.536
SIR23300.1
Predicted acetyltransferase, GNAT superfamily.
       0.532
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.