STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR35815.1Transcriptional regulator, TetR family. (210 aa)    
Predicted Functional Partners:
SIR35778.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.727
SIQ74553.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
  
     0.531
SIS19608.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
     0.485
SIR60128.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
  
     0.477
SIS18764.1
Uncharacterized conserved protein.
  
     0.471
SIR34569.1
Hypothetical protein.
  
     0.451
SIR35840.1
Two component transcriptional regulator, LuxR family.
       0.450
SIR35869.1
Signal transduction histidine kinase.
       0.450
SIR35899.1
ABC-2 type transport system permease protein.
       0.450
SIR99842.1
Uncharacterized conserved protein.
  
     0.431
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.