STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR43218.1Histidine kinase-like ATPase domain-containing protein. (159 aa)    
Predicted Functional Partners:
SIQ70590.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.700
SIS05986.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.676
SIR92047.1
PAS domain S-box-containing protein.
 
 
 0.657
SIS23275.1
Anti-sigma B factor antagonist.
  
   0.641
SIR74340.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
   0.621
SIQ87336.1
Anti-sigma-factor antagonist.
  
   0.619
SIS19528.1
Hypothetical protein.
  
     0.601
SIS22951.1
PAS domain S-box-containing protein.
  
 0.589
SIS17076.1
Stage II sporulation protein E (SpoIIE).
  
   0.574
SIS22583.1
Hypothetical protein.
  
     0.566
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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