Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ28897.1 | SIR61544.1 | SAMN05421833_101408 | SAMN05421833_111207 | DNA polymerase-3 subunit alpha. | Uncharacterized protein, YigZ family. | 0.435 |
SIQ28897.1 | SIS19409.1 | SAMN05421833_101408 | SAMN05421833_13643 | DNA polymerase-3 subunit alpha. | Heat shock protein Hsp15. | 0.435 |
SIQ77168.1 | SIR61544.1 | SAMN05421833_103402 | SAMN05421833_111207 | Exonuclease SbcC. | Uncharacterized protein, YigZ family. | 0.440 |
SIQ77168.1 | sbcD | SAMN05421833_103402 | SAMN05421833_103403 | Exonuclease SbcC. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.999 |
SIR61504.1 | SIR61524.1 | SAMN05421833_111205 | SAMN05421833_111206 | Glutamate carboxypeptidase. | Membrane dipeptidase. | 0.830 |
SIR61504.1 | SIR61544.1 | SAMN05421833_111205 | SAMN05421833_111207 | Glutamate carboxypeptidase. | Uncharacterized protein, YigZ family. | 0.561 |
SIR61524.1 | SIR61504.1 | SAMN05421833_111206 | SAMN05421833_111205 | Membrane dipeptidase. | Glutamate carboxypeptidase. | 0.830 |
SIR61524.1 | SIR61544.1 | SAMN05421833_111206 | SAMN05421833_111207 | Membrane dipeptidase. | Uncharacterized protein, YigZ family. | 0.561 |
SIR61544.1 | SIQ28897.1 | SAMN05421833_111207 | SAMN05421833_101408 | Uncharacterized protein, YigZ family. | DNA polymerase-3 subunit alpha. | 0.435 |
SIR61544.1 | SIQ77168.1 | SAMN05421833_111207 | SAMN05421833_103402 | Uncharacterized protein, YigZ family. | Exonuclease SbcC. | 0.440 |
SIR61544.1 | SIR61504.1 | SAMN05421833_111207 | SAMN05421833_111205 | Uncharacterized protein, YigZ family. | Glutamate carboxypeptidase. | 0.561 |
SIR61544.1 | SIR61524.1 | SAMN05421833_111207 | SAMN05421833_111206 | Uncharacterized protein, YigZ family. | Membrane dipeptidase. | 0.561 |
SIR61544.1 | SIS19409.1 | SAMN05421833_111207 | SAMN05421833_13643 | Uncharacterized protein, YigZ family. | Heat shock protein Hsp15. | 0.697 |
SIR61544.1 | sbcD | SAMN05421833_111207 | SAMN05421833_103403 | Uncharacterized protein, YigZ family. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.420 |
SIS19409.1 | SIQ28897.1 | SAMN05421833_13643 | SAMN05421833_101408 | Heat shock protein Hsp15. | DNA polymerase-3 subunit alpha. | 0.435 |
SIS19409.1 | SIR61544.1 | SAMN05421833_13643 | SAMN05421833_111207 | Heat shock protein Hsp15. | Uncharacterized protein, YigZ family. | 0.697 |
sbcD | SIQ77168.1 | SAMN05421833_103403 | SAMN05421833_103402 | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Exonuclease SbcC. | 0.999 |
sbcD | SIR61544.1 | SAMN05421833_103403 | SAMN05421833_111207 | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Uncharacterized protein, YigZ family. | 0.420 |