STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR58969.1D-lactate dehydrogenase. (947 aa)    
Predicted Functional Partners:
SIQ30661.1
Glutamate synthase (NADPH/NADH) large chain.
   
 0.965
SIQ17706.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.927
SIR54154.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.913
SIQ76690.1
2-oxoisovalerate dehydrogenase E1 component.
   
 0.880
SIR44828.1
L-lactate dehydrogenase complex protein LldF.
 
 0.851
SIQ97647.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.844
SIQ89033.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.824
SIR68960.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
  0.801
SIR58989.1
Threonine dehydrogenase.
 
  0.787
SIR44801.1
L-lactate dehydrogenase complex protein LldG.
 
 
 0.786
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.