STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR63721.1Polar amino acid transport system permease protein. (217 aa)    
Predicted Functional Partners:
SIR63742.1
Polar amino acid transport system ATP-binding protein.
  0.978
SIR63682.1
Polar amino acid transport system substrate-binding protein.
 
  0.964
SIR54506.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  0.960
SIR02477.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.934
SIR54456.1
Polar amino acid transport system ATP-binding protein.
  0.934
SIR84888.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.934
SIS06197.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.934
SIS16982.1
Glutamate transport system ATP-binding protein.
  0.934
SIS21620.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.934
SIR63703.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  
 
0.886
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.