STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR64961.1PPOX class probable F420-dependent enzyme. (153 aa)    
Predicted Functional Partners:
SIR64945.1
Predicted arabinose efflux permease, MFS family.
       0.709
SIR25201.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
     0.557
SIR59262.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.538
SIR47993.1
GAF domain-containing protein.
 
     0.521
SIQ22071.1
Hypothetical protein.
   
    0.516
SIS15600.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.515
SIQ27143.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.456
SIS23299.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.456
SIR64979.1
Transcriptional regulator, TetR family.
       0.442
SIQ51474.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
  
  0.441
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.