STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR70103.1Amino acid adenylation domain-containing protein. (1044 aa)    
Predicted Functional Partners:
SIR94314.1
Acyl transferase domain-containing protein.
 0.999
SIR70058.1
Uncharacterized conserved protein YbdZ, MbtH family.
 
 0.993
SIR70003.1
Phosphopantetheine attachment site.
 
0.992
SIS04183.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 
0.955
SIR96537.1
Taurine dioxygenase, alpha-ketoglutarate-dependent.
  
 0.943
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
  0.918
SIR70022.1
Hypothetical protein.
  
  0.902
SIR96527.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
    
0.888
SIR16864.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
      0.882
SIR69985.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 
0.877
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.