STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR73296.1Osmoprotectant transport system ATP-binding protein. (356 aa)    
Predicted Functional Partners:
SIR73313.1
Osmoprotectant transport system permease protein.
 
 0.999
SIR73325.1
Osmoprotectant transport system permease protein.
 0.999
SIR73343.1
Osmoprotectant transport system substrate-binding protein.
 0.999
SIS05753.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
     
0.873
SIR63889.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.856
SIR85077.1
Glycine betaine/proline transport system permease protein.
 
  
 0.629
SIS20465.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  
 
0.438
SIR63871.1
Molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.428
SIS20458.1
Sn-glycerol 3-phosphate transport system ATP-binding protein/multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.426
SIR73276.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24 family.
       0.422
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.