Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIR73735.1 | SIR73748.1 | SAMN05421833_11470 | SAMN05421833_11471 | Pimeloyl-ACP methyl ester carboxylesterase. | Regulatory protein, luxR family. | 0.886 |
SIR73735.1 | SIR73765.1 | SAMN05421833_11470 | SAMN05421833_11472 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.540 |
SIR73735.1 | SIR73782.1 | SAMN05421833_11470 | SAMN05421833_11473 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.540 |
SIR73735.1 | SIR73799.1 | SAMN05421833_11470 | SAMN05421833_11474 | Pimeloyl-ACP methyl ester carboxylesterase. | D-amino peptidase. | 0.540 |
SIR73735.1 | SIR73811.1 | SAMN05421833_11470 | SAMN05421833_11475 | Pimeloyl-ACP methyl ester carboxylesterase. | Monoamine oxidase. | 0.438 |
SIR73735.1 | SIR73829.1 | SAMN05421833_11470 | SAMN05421833_11476 | Pimeloyl-ACP methyl ester carboxylesterase. | Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC. | 0.438 |
SIR73748.1 | SIR73735.1 | SAMN05421833_11471 | SAMN05421833_11470 | Regulatory protein, luxR family. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.886 |
SIR73748.1 | SIR73765.1 | SAMN05421833_11471 | SAMN05421833_11472 | Regulatory protein, luxR family. | Hypothetical protein. | 0.540 |
SIR73748.1 | SIR73782.1 | SAMN05421833_11471 | SAMN05421833_11473 | Regulatory protein, luxR family. | Hypothetical protein. | 0.540 |
SIR73748.1 | SIR73799.1 | SAMN05421833_11471 | SAMN05421833_11474 | Regulatory protein, luxR family. | D-amino peptidase. | 0.540 |
SIR73748.1 | SIR73811.1 | SAMN05421833_11471 | SAMN05421833_11475 | Regulatory protein, luxR family. | Monoamine oxidase. | 0.438 |
SIR73748.1 | SIR73829.1 | SAMN05421833_11471 | SAMN05421833_11476 | Regulatory protein, luxR family. | Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC. | 0.438 |
SIR73765.1 | SIR73735.1 | SAMN05421833_11472 | SAMN05421833_11470 | Hypothetical protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.540 |
SIR73765.1 | SIR73748.1 | SAMN05421833_11472 | SAMN05421833_11471 | Hypothetical protein. | Regulatory protein, luxR family. | 0.540 |
SIR73765.1 | SIR73782.1 | SAMN05421833_11472 | SAMN05421833_11473 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SIR73765.1 | SIR73799.1 | SAMN05421833_11472 | SAMN05421833_11474 | Hypothetical protein. | D-amino peptidase. | 0.774 |
SIR73765.1 | SIR73811.1 | SAMN05421833_11472 | SAMN05421833_11475 | Hypothetical protein. | Monoamine oxidase. | 0.613 |
SIR73765.1 | SIR73829.1 | SAMN05421833_11472 | SAMN05421833_11476 | Hypothetical protein. | Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC. | 0.613 |
SIR73765.1 | SIR73845.1 | SAMN05421833_11472 | SAMN05421833_11477 | Hypothetical protein. | Serine/threonine protein kinase. | 0.421 |
SIR73765.1 | SIR73861.1 | SAMN05421833_11472 | SAMN05421833_11478 | Hypothetical protein. | Serine/threonine protein kinase. | 0.411 |
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