STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR78513.14-oxalocrotonate tautomerase. (68 aa)    
Predicted Functional Partners:
SIR88771.1
2-oxo-hept-3-ene-1,7-dioate hydratase.
    
 0.853
SIR66537.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
  
 0.728
SIR88782.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
  
 
 0.721
SIR78496.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.691
SIR99878.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
 
     0.616
SIR78479.1
Transcriptional regulator, TetR family.
 
     0.552
SIR69334.1
Transcriptional regulator, TetR family.
  
     0.549
SIS12691.1
Hypothetical protein.
 
     0.494
SIR45759.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.444
SIQ17303.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.415
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.