STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR79595.1MarR family protein. (236 aa)    
Predicted Functional Partners:
SIR78139.1
Putative adhesin.
 
     0.730
SIR03079.1
DNA-binding transcriptional regulator GbsR, MarR family.
  
     0.551
SIQ88693.1
Transcriptional regulator, TetR family.
  
     0.519
SIR79581.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.462
SIR59042.1
DNA-binding transcriptional regulator, MerR family.
  
     0.459
SIR94056.1
Helix-turn-helix domain-containing protein.
  
     0.453
SIS19937.1
FBP C-terminal treble-clef zinc-finger.
  
     0.440
SIS20107.1
DNA-binding transcriptional activator of the SARP family.
  
     0.439
SIR79521.1
Transcriptional regulator, TetR family.
  
     0.405
SIR86449.1
DNA-binding transcriptional activator of the SARP family.
  
     0.404
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.