STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR77568.1Cellobiose transport system permease protein. (318 aa)    
Predicted Functional Partners:
SIR77585.1
Cellobiose transport system permease protein.
  0.984
SIR77552.1
Cellobiose transport system substrate-binding protein.
 
  0.969
SIR70148.1
Cellobiose transport system permease protein.
  0.939
SIR70175.1
Cellobiose transport system substrate-binding protein.
 
  0.922
SIR29848.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.920
SIR97237.1
Multiple sugar transport system permease protein.
  0.906
SIQ98886.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.895
SIS22378.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.894
SIR69632.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.893
SIS02041.1
Raffinose/stachyose/melibiose transport system permease protein.
  0.893
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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