STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR77635.1DNA-binding transcriptional regulator, MerR family. (303 aa)    
Predicted Functional Partners:
SIS22695.1
DNA-binding transcriptional regulator, MerR family.
  
     0.704
SIS21500.1
DNA-binding transcriptional regulator, MerR family.
  
     0.692
SIR06101.1
DNA-binding transcriptional regulator, MerR family.
  
     0.673
SIR28805.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 
 
  0.673
accD
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 
 
  0.659
SIQ45033.1
DNA-binding transcriptional regulator, MerR family.
  
     0.642
SIR26149.1
DNA-binding transcriptional regulator, MerR family.
  
     0.632
SIQ28750.1
DNA-binding transcriptional regulator, MerR family.
  
     0.624
SIQ76989.1
DNA-binding transcriptional regulator, MerR family.
  
     0.592
SIR90439.1
DNA-binding transcriptional regulator, MerR family.
  
     0.562
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.