STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR81212.1BadF-type ATPase. (363 aa)    
Predicted Functional Partners:
SIR81199.1
6-phospho-beta-glucosidase.
 
     0.947
SIR81166.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
    0.918
SIR81189.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.840
SIR81150.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.828
SIR81177.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.827
SIQ43462.1
N-acetylglucosamine-6-phosphate deacetylase.
    
 0.758
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
   
 
 0.699
SIQ52728.1
Glutamine--fructose-6-phosphate transaminase.
  
 
 0.676
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.676
SIS03874.1
BadF-type ATPase.
  
     0.599
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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