STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR85963.1Urea ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (284 aa)    
Predicted Functional Partners:
SIR85974.1
Urea ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SIR85984.1
Urea ABC transporter ATP-binding protein.
 
 0.996
SIQ71948.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
SIR85952.1
Urea-binding protein.
 
 
 0.993
SIR85994.1
Urea transport system ATP-binding protein.
 
 
 0.990
SIQ99599.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
 
 0.971
SIQ31158.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.966
SIQ31222.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.966
SIQ31546.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.964
SIQ31405.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.962
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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