STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR91466.1Catechol 2,3-dioxygenase. (151 aa)    
Predicted Functional Partners:
SIR91482.1
ArsR family transcriptional regulator.
 
     0.648
SIR54154.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.607
SIR68960.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.594
SIR88391.1
Arsenite transporter, ACR3 family.
  
  
 0.562
SIR91493.1
L-amino acid N-acyltransferase YncA.
       0.531
SIQ99816.1
Glyoxylase, beta-lactamase superfamily II.
  
 
  0.462
SIR74469.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.462
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
  0.457
SIR88184.1
Arsenate reductase; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
     0.413
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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