STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR90654.1Protein of unknown function. (226 aa)    
Predicted Functional Partners:
SIR90666.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.773
SIR90674.1
Putative zinc-finger.
       0.773
SIR90712.1
Protein of unknown function.
 
     0.716
SIR90684.1
Thiol-disulfide isomerase or thioredoxin.
       0.673
SIR90642.1
Molybdopterin converting factor, small subunit.
       0.656
SIS18032.1
SCP-2 sterol transfer family protein.
  
     0.632
SIS17455.1
Transcriptional regulator.
  
     0.625
SIS22583.1
Hypothetical protein.
 
     0.615
SIQ25393.1
Acetyltransferase (GNAT) family protein.
 
     0.608
SIQ76216.1
Hypothetical protein.
  
     0.597
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.