Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ74914.1 | SIR47680.1 | SAMN05421833_103334 | SAMN05421833_109213 | Acyl-CoA dehydrogenase. | fatty-acyl-CoA synthase. | 0.563 |
SIQ74914.1 | SIR48046.1 | SAMN05421833_103334 | SAMN05421833_109230 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.496 |
SIQ74914.1 | SIR96833.1 | SAMN05421833_103334 | SAMN05421833_12137 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.467 |
SIQ74914.1 | SIR96846.1 | SAMN05421833_103334 | SAMN05421833_12138 | Acyl-CoA dehydrogenase. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.831 |
SIQ76543.1 | SIR47680.1 | SAMN05421833_103386 | SAMN05421833_109213 | Acyl-CoA dehydrogenase. | fatty-acyl-CoA synthase. | 0.563 |
SIQ76543.1 | SIR96846.1 | SAMN05421833_103386 | SAMN05421833_12138 | Acyl-CoA dehydrogenase. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.813 |
SIR47048.1 | SIR47680.1 | SAMN05421833_109179 | SAMN05421833_109213 | Acyl-CoA dehydrogenase. | fatty-acyl-CoA synthase. | 0.563 |
SIR47048.1 | SIR48046.1 | SAMN05421833_109179 | SAMN05421833_109230 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.442 |
SIR47048.1 | SIR96833.1 | SAMN05421833_109179 | SAMN05421833_12137 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.451 |
SIR47048.1 | SIR96846.1 | SAMN05421833_109179 | SAMN05421833_12138 | Acyl-CoA dehydrogenase. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.910 |
SIR47680.1 | SIQ74914.1 | SAMN05421833_109213 | SAMN05421833_103334 | fatty-acyl-CoA synthase. | Acyl-CoA dehydrogenase. | 0.563 |
SIR47680.1 | SIQ76543.1 | SAMN05421833_109213 | SAMN05421833_103386 | fatty-acyl-CoA synthase. | Acyl-CoA dehydrogenase. | 0.563 |
SIR47680.1 | SIR47048.1 | SAMN05421833_109213 | SAMN05421833_109179 | fatty-acyl-CoA synthase. | Acyl-CoA dehydrogenase. | 0.563 |
SIR47680.1 | SIR48046.1 | SAMN05421833_109213 | SAMN05421833_109230 | fatty-acyl-CoA synthase. | acyl-CoA dehydrogenase. | 0.563 |
SIR47680.1 | SIR96811.1 | SAMN05421833_109213 | SAMN05421833_12135 | fatty-acyl-CoA synthase. | Acyl-CoA dehydrogenase. | 0.563 |
SIR47680.1 | SIR96820.1 | SAMN05421833_109213 | SAMN05421833_12136 | fatty-acyl-CoA synthase. | Acyl-CoA dehydrogenase. | 0.563 |
SIR47680.1 | SIR96833.1 | SAMN05421833_109213 | SAMN05421833_12137 | fatty-acyl-CoA synthase. | acyl-CoA dehydrogenase. | 0.619 |
SIR47680.1 | SIR96846.1 | SAMN05421833_109213 | SAMN05421833_12138 | fatty-acyl-CoA synthase. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.604 |
SIR48046.1 | SIQ74914.1 | SAMN05421833_109230 | SAMN05421833_103334 | acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.496 |
SIR48046.1 | SIR47048.1 | SAMN05421833_109230 | SAMN05421833_109179 | acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.442 |
page 1 of 3