STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS02238.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
SIS19828.1
Hypothetical protein.
  
     0.680
SIS02228.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
       0.623
SIR87791.1
Catechol 2,3-dioxygenase.
  
     0.606
SIS02196.1
Homogentisate 1,2-dioxygenase.
       0.539
SIS02220.1
Fumarylacetoacetate hydrolase.
       0.539
SIR77701.1
Protein of unknown function.
  
     0.529
SIS02245.1
Membrane protein implicated in regulation of membrane protease activity.
       0.510
SIS02253.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
       0.510
SIQ73901.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
     0.423
SIR64961.1
PPOX class probable F420-dependent enzyme.
  
     0.416
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.