STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS02607.1Transcriptional regulator, AraC family. (160 aa)    
Predicted Functional Partners:
SIS02601.1
Catechol 2,3-dioxygenase.
 
     0.928
SIQ30661.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.696
SIR91031.1
Hypothetical protein.
 
     0.691
SIR11866.1
Transcriptional regulator, AraC family with amidase-like domain.
  
   0.652
SIS20648.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
 
     0.633
ribBA
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.599
SIS14805.1
Transcriptional regulator, AraC family with amidase-like domain.
  
   0.581
SIS02616.1
Transcriptional regulator, TetR family.
       0.546
SIR65141.1
Transcriptional regulator, AraC family with amidase-like domain.
  
   0.539
SIR48195.1
Signal transduction histidine kinase.
    
 0.503
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.