STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS03804.1HNH endonuclease. (189 aa)    
Predicted Functional Partners:
SIR81940.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
  
  0.734
SIQ98295.1
Protein of unknown function.
  
     0.721
SIQ99226.1
Protein of unknown function.
  
     0.712
SIS15611.1
Protein of unknown function.
  
     0.710
SIQ86861.1
Protein of unknown function.
  
     0.704
SIS23706.1
Protein of unknown function.
  
     0.686
SIR55941.1
Protein of unknown function.
  
     0.596
SIS25279.1
Protein of unknown function.
  
     0.575
SIR81054.1
Protein of unknown function.
  
     0.568
SIR14765.1
Uncharacterized HhH-GPD family protein.
  
     0.439
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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