STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS05827.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
SIS05818.1
Transcriptional regulator, TetR family.
       0.526
SIR52702.1
Protein of unknown function.
  
     0.501
SIS09372.1
Peptidase family M23.
  
   
 0.440
SIR46554.1
Sulfotransferase family protein.
 
     0.433
SIR71483.1
Sulfotransferase family protein.
  
     0.426
SIS00447.1
Small secreted domain.
  
     0.410
SIS05809.1
Probable F420-dependent oxidoreductase, MSMEG_4141 family/probable F420-dependent oxidoreductase, Rv3093c family.
       0.400
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.