STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS07933.1Phosphatase. (263 aa)    
Predicted Functional Partners:
SIS08461.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.746
SIS07945.1
Acetoin utilization protein AcuC.
       0.729
SIS07765.1
Bifunctional DNA primase/polymerase, N-terminal.
  
     0.716
SIQ70590.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.708
SIS08297.1
Hypothetical protein.
  
     0.680
SIS25455.1
Histidine kinase-like ATPase domain-containing protein.
  
     0.664
SIQ85535.1
Hypothetical protein.
  
     0.655
atpE
F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
 0.639
SIR15413.1
Hypothetical protein.
  
     0.612
SIR60951.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
 
   
 0.605
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.