STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS09657.1Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (164 aa)    
Predicted Functional Partners:
SIS09632.1
Gas vesicle protein K.
 
   
 0.969
SIS09638.1
Gas vesicle protein.
 
   
 0.963
SIS09647.1
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.963
SIS09666.1
Gas vesicle synthesis protein GvpO.
 
   
 0.962
SIS09683.1
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.962
SIS09700.1
Uncharacterized membrane protein.
 
     0.889
gvpA
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
0.878
SIS09674.1
Gas vesicle protein G.
     
 0.845
SIS09705.1
Hypothetical protein.
       0.643
SIS09622.1
Hypothetical protein.
       0.576
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.