STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS13367.1Vanillate O-demethylase monooxygenase subunit. (354 aa)    
Predicted Functional Partners:
SIS13358.1
Ferredoxin-NADP reductase.
 
 
 0.952
SIS23836.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
    
 0.828
SIS13364.1
Hypothetical protein.
       0.798
SIS13373.1
fatty-acyl-CoA synthase.
  
 
  0.794
SIS10249.1
Ferredoxin-NADP reductase.
  
 
 0.744
SIS13379.1
Sugar phosphate permease.
       0.737
SIQ67027.1
Protocatechuate 4,5-dioxygenase, beta chain.
 
  
 0.731
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 
  0.682
SIS24669.1
Hypothetical protein.
  
  
  0.668
SIS24700.1
Hypothetical protein.
  
     0.629
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.