STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS13463.1Xylan 1,4-beta-xylosidase. (518 aa)    
Predicted Functional Partners:
SIS13447.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
     0.947
SIS13471.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
     0.871
SIS13456.1
Hypothetical protein.
       0.798
SIS13440.1
Lysophospholipase L1.
       0.773
SIS13478.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.773
SIS13486.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.771
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
  0.736
SIS10057.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.681
SIS24106.1
Hypothetical protein.
  
  
  0.592
SIR22999.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.553
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.