Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ26531.1 | SIQ26557.1 | SAMN05421833_101329 | SAMN05421833_101330 | Alkanesulfonate monooxygenase. | Sulfonate transport system substrate-binding protein. | 0.982 |
SIQ26531.1 | SIQ26604.1 | SAMN05421833_101329 | SAMN05421833_101332 | Alkanesulfonate monooxygenase. | Sulfonate transport system permease protein. | 0.989 |
SIQ26531.1 | SIR27719.1 | SAMN05421833_101329 | SAMN05421833_107189 | Alkanesulfonate monooxygenase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. | 0.843 |
SIQ26531.1 | SIR27791.1 | SAMN05421833_101329 | SAMN05421833_107191 | Alkanesulfonate monooxygenase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.848 |
SIQ26531.1 | SIS13762.1 | SAMN05421833_101329 | SAMN05421833_13073 | Alkanesulfonate monooxygenase. | FMN reductase. | 0.978 |
SIQ26531.1 | SIS13771.1 | SAMN05421833_101329 | SAMN05421833_13074 | Alkanesulfonate monooxygenase. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.653 |
SIQ26531.1 | ssuB | SAMN05421833_101329 | SAMN05421833_101331 | Alkanesulfonate monooxygenase. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.979 |
SIQ26557.1 | SIQ26531.1 | SAMN05421833_101330 | SAMN05421833_101329 | Sulfonate transport system substrate-binding protein. | Alkanesulfonate monooxygenase. | 0.982 |
SIQ26557.1 | SIQ26604.1 | SAMN05421833_101330 | SAMN05421833_101332 | Sulfonate transport system substrate-binding protein. | Sulfonate transport system permease protein. | 0.999 |
SIQ26557.1 | SIR46268.1 | SAMN05421833_101330 | SAMN05421833_109136 | Sulfonate transport system substrate-binding protein. | Alkanesulfonate monooxygenase. | 0.917 |
SIQ26557.1 | SIS13762.1 | SAMN05421833_101330 | SAMN05421833_13073 | Sulfonate transport system substrate-binding protein. | FMN reductase. | 0.940 |
SIQ26557.1 | ssuB | SAMN05421833_101330 | SAMN05421833_101331 | Sulfonate transport system substrate-binding protein. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.996 |
SIQ26604.1 | SIQ26531.1 | SAMN05421833_101332 | SAMN05421833_101329 | Sulfonate transport system permease protein. | Alkanesulfonate monooxygenase. | 0.989 |
SIQ26604.1 | SIQ26557.1 | SAMN05421833_101332 | SAMN05421833_101330 | Sulfonate transport system permease protein. | Sulfonate transport system substrate-binding protein. | 0.999 |
SIQ26604.1 | SIR46268.1 | SAMN05421833_101332 | SAMN05421833_109136 | Sulfonate transport system permease protein. | Alkanesulfonate monooxygenase. | 0.953 |
SIQ26604.1 | SIS13762.1 | SAMN05421833_101332 | SAMN05421833_13073 | Sulfonate transport system permease protein. | FMN reductase. | 0.924 |
SIQ26604.1 | ssuB | SAMN05421833_101332 | SAMN05421833_101331 | Sulfonate transport system permease protein. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.998 |
SIR15509.1 | SIR27719.1 | SAMN05421833_106197 | SAMN05421833_107189 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. | 0.871 |
SIR15509.1 | SIR27791.1 | SAMN05421833_106197 | SAMN05421833_107191 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.880 |
SIR15509.1 | SIS13762.1 | SAMN05421833_106197 | SAMN05421833_13073 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | FMN reductase. | 0.856 |
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