Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ65199.1 | SIS14504.1 | SAMN05421833_10337 | SAMN05421833_13113 | DNA-binding regulatory protein, YebC/PmpR family. | Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.583 |
SIR69968.1 | SIR70003.1 | SAMN05421833_11381 | SAMN05421833_11383 | Amino acid adenylation domain-containing protein. | Phosphopantetheine attachment site. | 0.996 |
SIR69968.1 | SIR94314.1 | SAMN05421833_11381 | SAMN05421833_12063 | Amino acid adenylation domain-containing protein. | Acyl transferase domain-containing protein. | 0.999 |
SIR69968.1 | SIR94514.1 | SAMN05421833_11381 | SAMN05421833_12079 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family. | 0.994 |
SIR69968.1 | SIS14504.1 | SAMN05421833_11381 | SAMN05421833_13113 | Amino acid adenylation domain-containing protein. | Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.528 |
SIR70003.1 | SIR69968.1 | SAMN05421833_11383 | SAMN05421833_11381 | Phosphopantetheine attachment site. | Amino acid adenylation domain-containing protein. | 0.996 |
SIR70003.1 | SIR94314.1 | SAMN05421833_11383 | SAMN05421833_12063 | Phosphopantetheine attachment site. | Acyl transferase domain-containing protein. | 0.998 |
SIR70003.1 | SIR94514.1 | SAMN05421833_11383 | SAMN05421833_12079 | Phosphopantetheine attachment site. | Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family. | 0.999 |
SIR70003.1 | SIS14504.1 | SAMN05421833_11383 | SAMN05421833_13113 | Phosphopantetheine attachment site. | Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.599 |
SIR94314.1 | SIR69968.1 | SAMN05421833_12063 | SAMN05421833_11381 | Acyl transferase domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SIR94314.1 | SIR70003.1 | SAMN05421833_12063 | SAMN05421833_11383 | Acyl transferase domain-containing protein. | Phosphopantetheine attachment site. | 0.998 |
SIR94314.1 | SIR94514.1 | SAMN05421833_12063 | SAMN05421833_12079 | Acyl transferase domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family. | 0.999 |
SIR94314.1 | SIS14504.1 | SAMN05421833_12063 | SAMN05421833_13113 | Acyl transferase domain-containing protein. | Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.615 |
SIR94514.1 | SIR69968.1 | SAMN05421833_12079 | SAMN05421833_11381 | Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family. | Amino acid adenylation domain-containing protein. | 0.994 |
SIR94514.1 | SIR70003.1 | SAMN05421833_12079 | SAMN05421833_11383 | Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family. | Phosphopantetheine attachment site. | 0.999 |
SIR94514.1 | SIR94314.1 | SAMN05421833_12079 | SAMN05421833_12063 | Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family. | Acyl transferase domain-containing protein. | 0.999 |
SIR94514.1 | SIS14504.1 | SAMN05421833_12079 | SAMN05421833_13113 | Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family. | Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.680 |
SIS14496.1 | SIS14504.1 | SAMN05421833_13112 | SAMN05421833_13113 | NCS1 nucleoside transporter family; Belongs to the purine-cytosine permease (2.A.39) family. | Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.825 |
SIS14496.1 | SIS14514.1 | SAMN05421833_13112 | SAMN05421833_13114 | NCS1 nucleoside transporter family; Belongs to the purine-cytosine permease (2.A.39) family. | Cytosine deaminase. | 0.834 |
SIS14496.1 | SIS14524.1 | SAMN05421833_13112 | SAMN05421833_13115 | NCS1 nucleoside transporter family; Belongs to the purine-cytosine permease (2.A.39) family. | Purine catabolism regulatory protein. | 0.643 |
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