STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS14504.1Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (318 aa)    
Predicted Functional Partners:
SIS14496.1
NCS1 nucleoside transporter family; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.825
SIS14514.1
Cytosine deaminase.
  
    0.793
SIR94514.1
Amino acid adenylation domain-containing protein; Belongs to the 4-oxalocrotonate tautomerase family.
     
 0.680
SIR94314.1
Acyl transferase domain-containing protein.
    
 0.615
SIR70003.1
Phosphopantetheine attachment site.
     
 0.599
SIQ65199.1
DNA-binding regulatory protein, YebC/PmpR family.
 
      0.583
SIS14524.1
Purine catabolism regulatory protein.
       0.573
SIS15997.1
Carbamoyltransferase.
     
 0.553
SIR69968.1
Amino acid adenylation domain-containing protein.
     
 0.528
SIS18863.1
Rieske 2Fe-2S family protein.
  
     0.505
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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