STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS15126.1GntR family transcriptional regulator. (250 aa)    
Predicted Functional Partners:
SIS15119.1
Ribosomal protein S18 acetylase RimI.
     0.779
SIQ52692.1
GntR family transcriptional regulator.
  
     0.775
SIR45299.1
GntR family transcriptional regulator.
  
     0.774
SIR88528.1
Transcriptional regulator, GntR family.
  
    0.600
SIS06050.1
Transcriptional regulator, GntR family.
  
    0.545
SIR61612.1
DNA-binding transcriptional regulator, FadR family.
  
    0.539
SIS15132.1
Hypothetical protein.
       0.530
SIR85573.1
Regulatory protein, gntR family.
  
     0.495
SIQ30040.1
DNA-binding transcriptional regulator, FadR family.
  
    0.444
SIS24940.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
    0.441
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.