STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS15605.1DNA-binding transcriptional regulator, MarR family. (153 aa)    
Predicted Functional Partners:
SIS23693.1
Hypothetical protein.
  
     0.564
SIS23689.1
CO dehydrogenase maturation factor.
  
     0.557
SIS15600.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
       0.556
SIS15611.1
Protein of unknown function.
       0.507
SIS15658.1
FtsX-like permease family protein.
  
     0.495
SIS20566.1
Hypothetical protein.
  
     0.479
SIS20063.1
Hypothetical protein.
  
     0.470
SIS01901.1
Transcriptional regulator, TetR family.
  
     0.446
SIR68900.1
ATPase family associated with various cellular activities (AAA).
  
     0.415
SIS22371.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
     0.404
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.