STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS16575.1Transcriptional regulator, TetR family. (209 aa)    
Predicted Functional Partners:
SIS09872.1
Transcriptional regulator, TetR family.
  
     0.648
SIR34569.1
Hypothetical protein.
  
     0.560
SIR86526.1
Peptidase family M23.
  
     0.482
SIS16584.1
Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.480
SIQ83495.1
ThiF family protein.
  
     0.459
SIS06042.1
Helix-turn-helix.
  
     0.441
SIQ19141.1
Hypothetical protein.
  
     0.440
SIS20660.1
Transcriptional regulator, TetR family.
  
     0.439
SIS21023.1
Hypothetical protein.
  
     0.431
SIQ92434.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.