Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ28856.1 | SIR92327.1 | SAMN05421833_101407 | SAMN05421833_119180 | DAHP synthetase I family protein. | L-aspartate aminotransferase apoenzyme. | 0.669 |
SIQ28856.1 | SIS16468.1 | SAMN05421833_101407 | SAMN05421833_1339 | DAHP synthetase I family protein. | Phenylalanine 4-hydroxylase. | 0.727 |
SIQ28856.1 | hisC | SAMN05421833_101407 | SAMN05421833_101421 | DAHP synthetase I family protein. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.760 |
SIQ28856.1 | pheA | SAMN05421833_101407 | SAMN05421833_115165 | DAHP synthetase I family protein. | Prephenate dehydratase. | 0.893 |
SIQ90109.1 | SIR92327.1 | SAMN05421833_104226 | SAMN05421833_119180 | 4-hydroxyphenylpyruvate dioxygenase. | L-aspartate aminotransferase apoenzyme. | 0.863 |
SIQ90109.1 | SIS02196.1 | SAMN05421833_104226 | SAMN05421833_12353 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.997 |
SIQ90109.1 | SIS15594.1 | SAMN05421833_104226 | SAMN05421833_13219 | 4-hydroxyphenylpyruvate dioxygenase. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.481 |
SIQ90109.1 | SIS16468.1 | SAMN05421833_104226 | SAMN05421833_1339 | 4-hydroxyphenylpyruvate dioxygenase. | Phenylalanine 4-hydroxylase. | 0.740 |
SIQ90109.1 | hisC | SAMN05421833_104226 | SAMN05421833_101421 | 4-hydroxyphenylpyruvate dioxygenase. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.858 |
SIR27185.1 | SIS16468.1 | SAMN05421833_107174 | SAMN05421833_1339 | Tyrosinase. | Phenylalanine 4-hydroxylase. | 0.765 |
SIR36284.1 | SIR92327.1 | SAMN05421833_108102 | SAMN05421833_119180 | L-2,4-diaminobutyrate decarboxylase. | L-aspartate aminotransferase apoenzyme. | 0.697 |
SIR36284.1 | SIS16468.1 | SAMN05421833_108102 | SAMN05421833_1339 | L-2,4-diaminobutyrate decarboxylase. | Phenylalanine 4-hydroxylase. | 0.736 |
SIR36284.1 | hisC | SAMN05421833_108102 | SAMN05421833_101421 | L-2,4-diaminobutyrate decarboxylase. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.683 |
SIR36284.1 | pheA | SAMN05421833_108102 | SAMN05421833_115165 | L-2,4-diaminobutyrate decarboxylase. | Prephenate dehydratase. | 0.684 |
SIR92327.1 | SIQ28856.1 | SAMN05421833_119180 | SAMN05421833_101407 | L-aspartate aminotransferase apoenzyme. | DAHP synthetase I family protein. | 0.669 |
SIR92327.1 | SIQ90109.1 | SAMN05421833_119180 | SAMN05421833_104226 | L-aspartate aminotransferase apoenzyme. | 4-hydroxyphenylpyruvate dioxygenase. | 0.863 |
SIR92327.1 | SIR36284.1 | SAMN05421833_119180 | SAMN05421833_108102 | L-aspartate aminotransferase apoenzyme. | L-2,4-diaminobutyrate decarboxylase. | 0.697 |
SIR92327.1 | SIS16468.1 | SAMN05421833_119180 | SAMN05421833_1339 | L-aspartate aminotransferase apoenzyme. | Phenylalanine 4-hydroxylase. | 0.855 |
SIR92327.1 | SIS22110.1 | SAMN05421833_119180 | SAMN05421833_14236 | L-aspartate aminotransferase apoenzyme. | Glutamate or tyrosine decarboxylase. | 0.710 |
SIR92327.1 | hisC | SAMN05421833_119180 | SAMN05421833_101421 | L-aspartate aminotransferase apoenzyme. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.863 |
page 1 of 3