STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS17439.1Sulfotransferase family protein. (292 aa)    
Predicted Functional Partners:
SIS21859.1
D-alanyl-D-alanine carboxypeptidase.
 
 
   0.806
SIR92047.1
PAS domain S-box-containing protein.
 
  
  0.789
SIR14720.1
Hypothetical protein.
  
     0.775
SIR14786.1
PAS domain S-box-containing protein.
  
  
  0.775
SIR44034.1
Nuclease-related domain-containing protein.
  
     0.775
SIQ87971.1
AAA-like domain-containing protein.
  
     0.774
SIR39193.1
Suppressor of fused protein (SUFU).
  
     0.774
SIQ87921.1
TrbL/VirB6 plasmid conjugal transfer protein.
  
     0.773
SIR65485.1
Uncharacterized conserved protein, LabA/DUF88 family.
  
     0.772
SIR65733.1
Hypothetical protein.
  
     0.772
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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