Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIR26506.1 | SIS18693.1 | SAMN05421833_107152 | SAMN05421833_13567 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.507 |
SIR90674.1 | SIS06425.1 | SAMN05421833_11952 | SAMN05421833_12585 | Putative zinc-finger. | Hypothetical protein. | 0.558 |
SIR90674.1 | SIS18693.1 | SAMN05421833_11952 | SAMN05421833_13567 | Putative zinc-finger. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.404 |
SIS06425.1 | SIR90674.1 | SAMN05421833_12585 | SAMN05421833_11952 | Hypothetical protein. | Putative zinc-finger. | 0.558 |
SIS06425.1 | SIS18693.1 | SAMN05421833_12585 | SAMN05421833_13567 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.402 |
SIS18686.1 | SIS18693.1 | SAMN05421833_13566 | SAMN05421833_13567 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.642 |
SIS18693.1 | SIR26506.1 | SAMN05421833_13567 | SAMN05421833_107152 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.507 |
SIS18693.1 | SIR90674.1 | SAMN05421833_13567 | SAMN05421833_11952 | RNA polymerase sigma-70 factor, ECF subfamily. | Putative zinc-finger. | 0.404 |
SIS18693.1 | SIS06425.1 | SAMN05421833_13567 | SAMN05421833_12585 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.402 |
SIS18693.1 | SIS18686.1 | SAMN05421833_13567 | SAMN05421833_13566 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.642 |
SIS18693.1 | SIS21136.1 | SAMN05421833_13567 | SAMN05421833_13946 | RNA polymerase sigma-70 factor, ECF subfamily. | Mycothiol system anti-sigma-R factor. | 0.404 |
SIS21136.1 | SIS18693.1 | SAMN05421833_13946 | SAMN05421833_13567 | Mycothiol system anti-sigma-R factor. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.404 |