STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS18309.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (307 aa)    
Predicted Functional Partners:
SIS18313.1
Multiple sugar transport system substrate-binding protein.
 
 0.938
SIS18304.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
0.924
SIR29848.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.921
SIR70411.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.906
SIQ98886.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.896
SIS22378.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.896
SIR69632.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.895
SIR70148.1
Cellobiose transport system permease protein.
 0.895
SIR77585.1
Cellobiose transport system permease protein.
 0.895
SIS02041.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.895
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.